Well...I guess sometimes what you need to do is take a break and have a coffee. I have been working to try and solve this issue for 2 days, and posted here as a last resort. After posting I had a cup of coffee and decided to audio probe the power nets on the board. In a comparison, the noisy board was...well noisier. So long story short - I replaced the regulator and voila! Problem solved. Maybe it was a bad component, I dont know. I dont care now!
Sorry to have wasted your time with my ramblings! Hopefully this helps someone else.
Sorry to have wasted your time with my ramblings! Hopefully this helps someone else.